Documentation

Manuals

• PlutoF version 3 manuals (last updated: 12.03.2017): plutof_manual_3_en.pdf,plutof_manual_3_et.pdf.
• Import module manuals (last updated: 12.03.2017): import_manual_3_en.pdf,import_manual_3_et.pdf.
• Taxonomy module manuals (last updated: 16.04.2017): taxonomy_manual_3_en.pdf,taxonomy_manual_3_et.pdf.
• Species Hypotheses manual (last updated: 25.02.2016): sh_manual_3_en.pdf.
• Third party annotations (last updated: 18.01.2022): annotations_manual_en.pdf.
• Managing project in PlutoF: managing_project_in_plutof.pdf.
• eDNA data management and mobilisation (last updated: 30.03.2026): PlutoF_eDNA_manual.pdf.

To cite PlutoF please use

Abarenkov, Kessy; Tedersoo, Leho; Nilsson, R. Henrik; Vellak, Kai; Saar, Irja; Veldre, Vilmar; Parmasto, Erast; Prous, Marko; Aan, Anne; Ots, Margus; Kurina, Olavi; Ostonen, Ivika; Jõgeva, Janno; Halapuu, Siim; Põldmaa, Kadri; Toots, Märt; Truu, Jaak; Larsson, Karl-Henrik; Kõljalg, Urmas (2010). PlutoF - a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences. Evolutionary Bioinformatics, 6, 189 - 196